STRINGSTRING
JNB_11009 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_11009" - Putative binding protein dependent transport protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_11009Putative binding protein dependent transport protein (296 aa)    
Predicted Functional Partners:
JNB_11004
Putative binding protein-dependent transport protein (317 aa)
 
  0.992
JNB_11014
Probable solute-binding lipoprotein (445 aa)
 
   
    0.982
JNB_16454
ABC transporter ATP-binding protein (367 aa)
 
  0.978
JNB_02235
Probable transmembrane transport protein (298 aa)
 
  0.951
JNB_01865
Sugar permease of ABC transporter system (284 aa)
 
  0.951
JNB_11349
Glycerol-3-phosphate ABC transporter permease protein (292 aa)
 
  0.951
JNB_13848
Putative transport system integral membrane protein (307 aa)
 
 
  0.950
JNB_01735
ABC-type glucosylglycerol transport system permease protein (317 aa)
 
 
  0.950
JNB_15433
Probable ABC transporter permease protein (271 aa)
 
  0.948
JNB_17793
Putative ABC transporter integral membrane permease (311 aa)
 
  0.948
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
Server load: low (8%) [HD]