STRINGSTRING
JNB_11369 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_11369" - Putative transcriptional regulator in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_11369Putative transcriptional regulator (223 aa)    
Predicted Functional Partners:
JNB_11364
Putative transmembrane efflux protein (479 aa)
              0.859
JNB_11359
Amidase (482 aa)
              0.658
JNB_11374
DNA-binding protein (192 aa)
              0.596
JNB_08774
Putative transcriptional regulator (222 aa)
   
          0.480
JNB_16469
Alpha/beta hydrolase fold protein (726 aa)
   
          0.465
JNB_13868
Putative hydrolase (301 aa)
   
          0.436
JNB_15953
Uncharacterized protein (204 aa)
   
          0.428
JNB_13133
Uncharacterized protein (191 aa)
   
          0.423
JNB_12953
Uncharacterized protein (95 aa)
   
          0.400
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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