STRINGSTRING
JNB_11854 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_11854" - Patatin in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_11854Patatin (274 aa)    
Predicted Functional Partners:
JNB_11859
Uncharacterized protein (338 aa)
 
          0.930
JNB_11849
Possible transmembrane phospholipid biosynthesis bifunctionnalenzyme plsc- putative l-3-phosphoserine phosphatase (464 aa)
   
 
  0.891
JNB_02610
Phospholipase D/Transphosphatidylase (532 aa)
 
 
  0.704
gpsA
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (332 aa)
 
 
  0.600
JNB_18508
Glycosyl transferase, group 1 (396 aa)
   
 
    0.592
JNB_03370
CDP-diacylglycerol--serine O-phosphatidyltransferase (311 aa)
 
   
    0.592
JNB_07879
Uncharacterized protein (252 aa)
   
  0.592
JNB_06529
Uncharacterized protein (278 aa)
   
  0.592
JNB_06229
Putative oxidoreductase (540 aa)
   
   
    0.586
JNB_11544
Ankyrin repeat protein (204 aa)
     
    0.577
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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