STRINGSTRING
JNB_12094 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_12094" - Putative membrane protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_12094Putative membrane protein (483 aa)    
Predicted Functional Partners:
JNB_07864
Hypothetical hydrophilic protein (77 aa)
   
          0.657
JNB_12089
Uncharacterized protein (137 aa)
              0.615
JNB_12084
Conserved protein DedA family protein (213 aa)
              0.571
JNB_06944
Uncharacterized protein (204 aa)
   
          0.542
JNB_09524
Uncharacterized protein (170 aa)
   
          0.533
JNB_10344
Uncharacterized protein (373 aa)
   
          0.506
JNB_06604
Peptide chain release factor 2 (467 aa)
   
          0.496
JNB_17763
Uncharacterized protein (772 aa)
   
          0.456
JNB_07614
Putative membrane protein (1413 aa)
   
          0.454
JNB_18533
Glycosyltransferase-like protein (451 aa)
   
          0.450
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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