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JNB_12229 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_12229" - Putative formamidopyrimidine-DNA glycosylase in Janibacter sp. HTCC2649
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_12229Putative formamidopyrimidine-DNA glycosylase (286 aa)    
Predicted Functional Partners:
JNB_03775
DNA polymerase (889 aa)
   
   
  0.882
JNB_12234
Uncharacterized protein (372 aa)
              0.863
fpg
DNA-(apurinic or apyrimidinic site) lyase MutM ; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3’- and 5’-phosphates (290 aa)
   
   
 
0.791
JNB_13703
Uncharacterized protein (284 aa)
   
   
 
0.764
JNB_14298
Putative formamidopyrimidine-DNA glycosylase (297 aa)
   
   
 
0.760
JNB_12239
Uncharacterized protein (250 aa)
 
          0.683
JNB_01680
DNA-directed DNA polymerase (1282 aa)
 
 
 
  0.661
coaD
Pantetheine-phosphate adenylyltransferase ; Reversibly transfers an adenylyl group from ATP to 4’- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate (167 aa)
   
 
  0.657
JNB_02890
Putative 5’-3’ exonuclease (333 aa)
 
   
  0.620
JNB_13643
Putative adenine glycosylase (304 aa)
   
 
  0.550
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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