STRINGSTRING
JNB_12234 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_12234" - Uncharacterized protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_12234Uncharacterized protein (372 aa)    
Predicted Functional Partners:
JNB_12229
Putative formamidopyrimidine-DNA glycosylase (286 aa)
              0.863
JNB_12239
Uncharacterized protein (250 aa)
              0.636
JNB_11514
Uncharacterized protein (311 aa)
 
          0.545
JNB_06524
Uncharacterized protein (220 aa)
   
          0.542
JNB_12224
PhoD (548 aa)
              0.527
JNB_11794
Uncharacterized protein (396 aa)
 
          0.525
JNB_01650
Uncharacterized protein (150 aa)
   
          0.520
JNB_08639
Uncharacterized protein (150 aa)
   
          0.518
JNB_12244
Uncharacterized protein (355 aa)
              0.483
JNB_18413
Uncharacterized protein (568 aa)
   
          0.460
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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