STRINGSTRING
JNB_12354 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_12354" - Putative transcriptional regulator in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_12354Putative transcriptional regulator (185 aa)    
Predicted Functional Partners:
JNB_12344
Uncharacterized protein (597 aa)
 
          0.966
JNB_12349
Uncharacterized protein (265 aa)
 
          0.947
JNB_12324
FadE12_2 (387 aa)
 
          0.882
JNB_12339
Putative acyl-CoA dehydrogenase (391 aa)
              0.880
JNB_12334
AccD2 (530 aa)
              0.818
JNB_12319
Putative enoyl-CoA hydratase/isomerase family protein (247 aa)
 
          0.752
JNB_12329
Putative acetyl/propionyl-CoA carboxylase alpha subunit (673 aa)
              0.724
JNB_12314
Uncharacterized protein (104 aa)
              0.605
JNB_11964
Uncharacterized protein (153 aa)
   
          0.516
JNB_12359
Uncharacterized protein (218 aa)
 
          0.488
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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