STRINGSTRING
JNB_12538 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_12538" - Uncharacterized protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_12538Uncharacterized protein (140 aa)    
Predicted Functional Partners:
JNB_12533
Putative transporter (391 aa)
 
          0.643
JNB_12543
Putative oxidoreductase (353 aa)
              0.601
JNB_03690
Probable conserved membrane protein (336 aa)
   
          0.531
JNB_12528
Putative hydrolase (263 aa)
   
        0.494
JNB_10909
Uncharacterized protein (226 aa)
   
          0.478
JNB_02520
Possible conserved transmembrane protein (203 aa)
   
          0.475
gyrA
DNA gyrase subunit A ; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (921 aa)
     
 
  0.457
JNB_01750
DNA topoisomerase (ATP-hydrolyzing) (816 aa)
     
 
  0.457
JNB_19973
Two-component system, regulatory protein (215 aa)
     
 
  0.453
JNB_18938
Putative two-component system response regulator (202 aa)
     
 
  0.453
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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