STRINGSTRING
JNB_12568 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_12568" - Transcriptional regulator in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_12568Transcriptional regulator (206 aa)    
Predicted Functional Partners:
JNB_12563
Predicted dioxygenase of extradiol dioxygenase family protein (140 aa)
              0.834
JNB_14183
Putative GntR-family transcriptional regulator (235 aa)
   
          0.712
JNB_12558
Putative methyltransferase, S-Adenosyl-L-methionine (SAM)-MTase protein (253 aa)
              0.624
JNB_10624
Uncharacterized protein (265 aa)
   
   
  0.563
JNB_12553
Putative ATP/GTP-binding protein (165 aa)
   
        0.547
JNB_12548
Uncharacterized protein (253 aa)
              0.538
JNB_12573
Universal stress protein family protein (293 aa)
              0.503
ispE
4-(cytidine-5’-diphospho)-2-C-methyl-D-erythritol kinase ; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol (312 aa)
 
          0.493
JNB_12578
Uncharacterized protein (84 aa)
              0.493
JNB_09349
Proline dehydrogenase (316 aa)
   
        0.478
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
Server load: low (11%) [HD]