STRINGSTRING
JNB_12618 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_12618" - Transport-associated protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_12618Transport-associated protein (223 aa)    
Predicted Functional Partners:
JNB_12623
Uncharacterized protein (44 aa)
              0.616
JNB_01370
Esterase, PHB depolymerase (408 aa)
   
          0.545
JNB_12628
Uncharacterized protein (378 aa)
              0.536
rsmI
rRNA (cytidine-2’-O-)-methyltransferase RsmI ; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (282 aa)
         
  0.424
JNB_13773
Uncharacterized protein (240 aa)
   
          0.421
JNB_19818
UPF0102 protein JNB_19818 (119 aa)
              0.420
JNB_18663
Ribosomal protein S6 modification protein (396 aa)
              0.420
gshB
Glutathione synthase (348 aa)
              0.420
JNB_14243
Uncharacterized protein (237 aa)
   
          0.417
JNB_18823
Uncharacterized protein (705 aa)
   
          0.414
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
Server load: low (9%) [HD]