STRINGSTRING
JNB_12668 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_12668" - Putative integral membrane protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_12668Putative integral membrane protein (235 aa)    
Predicted Functional Partners:
JNB_12663
Membrane protein, putative (423 aa)
              0.614
JNB_12658
Uncharacterized protein (162 aa)
              0.614
JNB_12653
Putative transcriptional regulator (114 aa)
              0.614
JNB_07319
Uncharacterized protein (184 aa)
   
          0.613
JNB_11919
Uncharacterized protein (270 aa)
   
          0.594
JNB_13518
Uncharacterized protein (230 aa)
   
          0.590
JNB_06479
Uncharacterized protein (586 aa)
   
          0.588
JNB_04430
Uncharacterized protein (231 aa)
   
          0.566
JNB_06274
ATP-dependent Clp protease adaptor protein ClpS (229 aa)
   
          0.565
JNB_12114
Uncharacterized protein (397 aa)
   
          0.533
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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