STRINGSTRING
JNB_12673 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_12673" - Uncharacterized protein in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_12673Uncharacterized protein (335 aa)    
Predicted Functional Partners:
gyrB
DNA gyrase subunit B ; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (719 aa)
     
 
  0.835
JNB_01720
DNA topoisomerase (ATP-hydrolyzing) (715 aa)
     
 
  0.835
gyrA
DNA gyrase subunit A ; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (921 aa)
     
 
  0.835
JNB_01750
DNA topoisomerase (ATP-hydrolyzing) (816 aa)
     
 
  0.835
JNB_12678
Uncharacterized protein (111 aa)
              0.756
JNB_02045
DNA ligase (713 aa)
 
      0.700
JNB_13733
DNA ligase (319 aa)
 
      0.697
JNB_16664
DNA ligase (112 aa)
 
      0.639
JNB_13738
DNA ligase (293 aa)
 
          0.616
JNB_05994
ATP-dependent DNA helicase (707 aa)
     
 
  0.599
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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