STRINGSTRING
JNB_12808 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_12808" - Uncharacterized protein in Janibacter sp. HTCC2649
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_12808Uncharacterized protein (565 aa)    
Predicted Functional Partners:
pnp
Polynucleotide phosphorylase ; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (807 aa)
   
 
  0.757
JNB_19898
Uridylate kinase ; Catalyzes the reversible phosphorylation of UMP to UDP (250 aa)
 
   
  0.715
JNB_20433
Uncharacterized protein (1003 aa)
     
 
  0.704
JNB_12803
Uncharacterized protein (301 aa)
              0.692
ksgA
S-adenosylmethionine-6-N’, N’-adenosyl(rRNA) dimethyltransferase ; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (295 aa)
   
        0.683
JNB_02005
Putative ribonuclease D (428 aa)
     
 
    0.630
JNB_11519
Uncharacterized protein (263 aa)
     
 
  0.628
JNB_06264
Uncharacterized protein (255 aa)
     
 
  0.628
JNB_13493
Putative RNA nucleotidyltransferase (483 aa)
         
  0.624
alaS
Alanyl-tRNA synthetase ; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (897 aa)
 
        0.609
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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