STRINGSTRING
JNB_13053 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_13053" - Putative delta fatty acid desaturase in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_13053Putative delta fatty acid desaturase (345 aa)    
Predicted Functional Partners:
JNB_13058
RNA polymerase sigma-70 factor (317 aa)
 
          0.655
JNB_04960
Putative ArsR-family transcriptional regulator (207 aa)
   
          0.586
JNB_00510
Putative integral membrane protein (139 aa)
   
          0.530
JNB_09209
MenE (392 aa)
     
 
    0.526
JNB_03430
Putative DNA-binding protein (199 aa)
   
          0.512
JNB_13063
Uncharacterized protein (122 aa)
              0.478
JNB_09624
Putative Acyl-CoA synthetase (525 aa)
     
 
    0.408
JNB_17588
Uncharacterized protein (114 aa)
   
          0.400
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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