STRINGSTRING
JNB_13083 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_13083" - Putative transmembrane transport protein in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_13083Putative transmembrane transport protein (346 aa)    
Predicted Functional Partners:
JNB_13088
Putative ABC transporter ATP-binding protein (306 aa)
 
          0.972
JNB_13093
Putative GntR-family transcriptional regulator (112 aa)
 
          0.969
JNB_17593
Secreted extracellular small neutral protease (214 aa)
   
          0.665
JNB_08839
Putative secreted hydrolase (351 aa)
   
          0.657
JNB_06604
Peptide chain release factor 2 (467 aa)
   
          0.608
JNB_13098
Uncharacterized protein (353 aa)
              0.566
JNB_04890
Uncharacterized protein (1151 aa)
   
          0.566
JNB_06839
Uncharacterized protein (909 aa)
   
          0.561
JNB_12029
Uncharacterized protein (311 aa)
   
          0.541
JNB_00095
Transcriptional regulator, MarR family protein (64 aa)
   
          0.535
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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