STRINGSTRING
JNB_13123 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_13123" - Uncharacterized protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_13123Uncharacterized protein (113 aa)    
Predicted Functional Partners:
JNB_10024
TetR/AcrR family transcriptional regulator (207 aa)
   
          0.675
JNB_13118
Putative short chain dehydrogenase (318 aa)
              0.656
JNB_08774
Putative transcriptional regulator (222 aa)
   
          0.608
JNB_19388
2-isopropylmalate synthase (153 aa)
   
          0.571
JNB_06804
Uncharacterized protein (420 aa)
 
          0.560
JNB_14173
Uncharacterized protein (219 aa)
   
          0.527
JNB_13128
Uncharacterized protein (215 aa)
              0.522
JNB_18233
Uncharacterized protein (162 aa)
   
          0.517
JNB_12199
Uncharacterized protein (405 aa)
   
          0.517
JNB_04810
Glycyl-tRNA synthetase (277 aa)
   
          0.491
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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