STRINGSTRING
JNB_13373 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_13373" - Putative integral membrane protein in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_13373Putative integral membrane protein (279 aa)    
Predicted Functional Partners:
JNB_13378
Putative ABC transporter ATP-binding protein (925 aa)
 
          0.972
JNB_03325
Uncharacterized protein (177 aa)
   
          0.661
JNB_04795
Putative RNA polymerase ECF-subfamily sigma factor (558 aa)
   
          0.615
JNB_11984
ABC transporter ATP-binding protein (570 aa)
   
          0.601
JNB_01530
Uncharacterized protein (133 aa)
   
          0.590
JNB_04395
Conserved membrane protein, putative permease (396 aa)
   
          0.568
JNB_13383
Metalloprotease (470 aa)
              0.554
JNB_13368
ABC transporter ATP-binding protein ; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system (337 aa)
              0.544
JNB_13363
ABC transporter, permease protein (227 aa)
              0.544
JNB_03580
Uncharacterized protein (227 aa)
   
          0.541
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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