STRINGSTRING
JNB_13423 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_13423" - Putative membrane protein insertion efficiency factor in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_13423Putative membrane protein insertion efficiency factor ; Could be involved in insertion of integral membrane proteins into the membrane (97 aa)    
Predicted Functional Partners:
JNB_13418
Ribonuclease P protein component ; RNaseP catalyzes the removal of the 5’-leader sequence from pre-tRNA to produce the mature 5’-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5’-leader sequence and broadening the substrate specificity of the ribozyme (90 aa)
              0.880
JNB_13428
Putative inner membrane protein translocase component YidC (335 aa)
   
 
  0.823
rpmH
50S ribosomal protein L34 (55 aa)
   
        0.758
JNB_13433
Putative Jag-like protein (218 aa)
   
        0.680
rsmG
16S rRNA 7-methylguanosine methyltransferase ; Specifically methylates the N7 position of a guanine in 16S rRNA (230 aa)
   
        0.670
dnaA
Chromosomal replication initiator protein DnaA ; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (516 aa)
   
        0.527
JNB_13493
Putative RNA nucleotidyltransferase (483 aa)
     
 
    0.476
JNB_03335
Uncharacterized protein (167 aa)
   
        0.432
JNB_13443
Putative partitioning or sporulation protein (402 aa)
   
        0.432
JNB_13403
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (377 aa)
   
        0.432
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
Server load: low (18%) [HD]