STRINGSTRING
JNB_13483 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_13483" - Putative DNA-binding protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_13483Putative DNA-binding protein (378 aa)    
Predicted Functional Partners:
JNB_13488
D-amino-acid dehydrogenase (426 aa)
 
          0.865
JNB_13478
Uncharacterized protein (160 aa)
              0.640
JNB_08904
Uncharacterized protein (574 aa)
   
          0.562
JNB_11414
Uncharacterized protein (209 aa)
   
          0.554
JNB_05919
Uncharacterized protein (126 aa)
   
          0.554
JNB_16644
Uncharacterized protein (626 aa)
   
          0.511
JNB_10419
Uncharacterized protein (193 aa)
   
          0.511
JNB_13473
Uncharacterized protein (742 aa)
              0.504
JNB_13468
Putative RNA polymerase ECF-subfamily sigma factor (192 aa)
              0.504
JNB_04880
Uncharacterized protein (277 aa)
 
          0.495
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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