STRINGSTRING
JNB_13523 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_13523" - Putative secreted protease in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_13523Putative secreted protease (958 aa)    
Predicted Functional Partners:
JNB_03065
Putative integral membrane protein (420 aa)
   
          0.608
JNB_14878
Putative integral membrane protein (722 aa)
   
          0.571
JNB_08054
Uncharacterized protein (429 aa)
   
          0.541
JNB_08049
Putative ArsR-family transcriptional regulator (202 aa)
   
          0.521
JNB_05899
Metalloprotease MEP1-like protein (313 aa)
   
          0.500
JNB_19323
Possible amino acid/metabolite permease (529 aa)
   
          0.471
JNB_17028
Uncharacterized protein (205 aa)
   
          0.459
JNB_18953
Acetyltransferase (372 aa)
   
          0.451
JNB_12224
PhoD (548 aa)
   
          0.446
JNB_13528
Uncharacterized protein (351 aa)
              0.441
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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