STRINGSTRING
JNB_13663 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_13663" - Putative lipoprotein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_13663Putative lipoprotein (226 aa)    
Predicted Functional Partners:
JNB_13658
Putative secreted protein (469 aa)
          0.980
JNB_14938
Uncharacterized protein (206 aa)
   
          0.722
JNB_10409
Putative membrane protein (260 aa)
 
          0.604
JNB_17028
Uncharacterized protein (205 aa)
   
          0.453
JNB_12034
Putative cation transporter (742 aa)
         
  0.420
JNB_01170
Putative cation-transporting ATPase (820 aa)
         
  0.420
JNB_01055
Putative cation transporter (762 aa)
         
  0.420
JNB_00940
Putative cation-transporting ATPase (656 aa)
         
  0.420
JNB_12024
Putative metal-binding protein (67 aa)
              0.420
JNB_01060
Putative metal-binding protein (73 aa)
              0.420
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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