Full Link:
STRINGSTRING
ku protein (Janibacter sp. HTCC2649) - STRING interaction network
"ku" - Non-homologous end joining protein Ku in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kuNon-homologous end joining protein Ku ; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5’- and 3’- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD (294 aa)    
Predicted Functional Partners:
JNB_02045
DNA ligase (713 aa)
 
   
  0.943
JNB_13738
DNA ligase (293 aa)
 
   
  0.913
JNB_13733
DNA ligase (319 aa)
 
   
  0.909
JNB_17683
Uncharacterized protein (331 aa)
 
   
  0.891
JNB_16664
DNA ligase (112 aa)
 
   
  0.863
JNB_12284
DNA ligase (539 aa)
 
   
  0.827
JNB_13723
Uncharacterized protein (1771 aa)
   
        0.617
JNB_12673
Uncharacterized protein (335 aa)
 
          0.531
JNB_10939
Uncharacterized protein (147 aa)
   
        0.469
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
Server load: low (8%) [HD]