STRINGSTRING
JNB_13728 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_13728" - Putative integral membrane protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_13728Putative integral membrane protein (406 aa)    
Predicted Functional Partners:
JNB_13738
DNA ligase (293 aa)
              0.649
JNB_13733
DNA ligase (319 aa)
              0.649
JNB_11179
Putative glycosyl transferase (423 aa)
 
          0.648
JNB_09604
Putative ATP/GTP-binding protein (219 aa)
   
          0.547
JNB_14308
Uncharacterized protein (163 aa)
   
          0.533
JNB_13803
Uncharacterized protein (292 aa)
   
          0.530
JNB_09589
Putative secreted protein (621 aa)
   
          0.498
JNB_13743
Uncharacterized protein (85 aa)
              0.488
JNB_18593
Putative secreted protein (486 aa)
   
          0.487
JNB_13723
Uncharacterized protein (1771 aa)
              0.477
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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