STRINGSTRING
JNB_13758 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_13758" - Putative Lsr2-like protein in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_13758Putative Lsr2-like protein (112 aa)    
Predicted Functional Partners:
JNB_13768
Lysyl-tRNA synthetase (509 aa)
              0.810
JNB_13763
Lysyl-tRNA synthetase (56 aa)
              0.745
JNB_06279
ATP-dependent Clp protease adapter protein ClpS ; Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation (96 aa)
   
          0.694
JNB_10119
Uncharacterized protein (313 aa)
   
          0.669
JNB_09214
Putative membrane protein (82 aa)
   
          0.634
JNB_09779
Uncharacterized protein (284 aa)
   
          0.620
JNB_13773
Uncharacterized protein (240 aa)
              0.618
JNB_16958
Putative integral membrane protein (517 aa)
   
          0.612
JNB_09374
Uncharacterized protein (279 aa)
   
          0.609
JNB_10089
Uncharacterized protein (52 aa)
   
          0.584
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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