STRINGSTRING
JNB_13868 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_13868" - Putative hydrolase in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_13868Putative hydrolase (301 aa)    
Predicted Functional Partners:
JNB_13863
Putative oxidoreductase (369 aa)
 
          0.727
JNB_14353
Uncharacterized protein (151 aa)
   
          0.691
JNB_14058
GCN5-related N-acetyltransferase (191 aa)
   
          0.680
JNB_13858
Putative fatty acid desaturase (444 aa)
 
          0.680
JNB_13873
Uncharacterized protein (113 aa)
              0.646
JNB_20008
Uncharacterized protein (214 aa)
   
          0.612
JNB_10829
Uncharacterized protein (215 aa)
   
          0.590
JNB_13133
Uncharacterized protein (191 aa)
   
          0.549
JNB_15113
Putative transcriptional regulator cold shock protein (314 aa)
   
          0.530
JNB_06629
Uncharacterized protein (153 aa)
   
          0.526
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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