STRINGSTRING
JNB_14428 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_14428" - Signal peptidase I in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_14428Signal peptidase I (192 aa)    
Predicted Functional Partners:
JNB_14423
Uncharacterized protein (178 aa)
              0.859
JNB_14438
Uncharacterized protein (121 aa)
              0.612
JNB_14433
Fibronectin type III domain protein (602 aa)
              0.612
JNB_14598
Uncharacterized protein (277 aa)
   
          0.532
JNB_14443
Response regulator receiver (246 aa)
              0.515
JNB_14448
Histidine kinase (446 aa)
              0.503
JNB_14453
Uncharacterized protein (183 aa)
              0.502
JNB_14258
Uncharacterized protein (362 aa)
   
          0.468
JNB_10734
Uncharacterized protein (59 aa)
   
          0.464
JNB_14473
Uncharacterized protein (137 aa)
              0.456
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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