STRINGSTRING
JNB_14553 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_14553" - Putative LysR-family transcriptional regulator in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_14553Putative LysR-family transcriptional regulator (303 aa)    
Predicted Functional Partners:
JNB_14563
Uncharacterized protein (324 aa)
              0.666
JNB_14558
Uncharacterized protein (112 aa)
              0.666
JNB_14548
Uncharacterized protein (56 aa)
              0.643
JNB_19858
Probable transcription regulator (LysR family) (309 aa)
   
          0.587
JNB_11074
LysR (298 aa)
   
        0.534
JNB_19863
C4-dicarboxylate transporter/malic acid transport protein (383 aa)
 
          0.502
JNB_03125
Putative transporter (330 aa)
     
      0.495
JNB_11979
Putative transcriptional regulator (291 aa)
     
   
  0.483
JNB_05714
Putative transcriptional regulator (148 aa)
     
   
  0.483
JNB_17508
Putative LacI-family transcriptional regulator (334 aa)
   
 
 
  0.472
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
Server load: low (9%) [HD]