STRINGSTRING
JNB_15568 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_15568" - Uncharacterized protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_15568Uncharacterized protein (465 aa)    
Predicted Functional Partners:
JNB_15563
Uncharacterized protein (185 aa)
 
          0.771
JNB_20078
Putative antibiotic transport protein (418 aa)
   
          0.693
JNB_09099
Putative export protein (426 aa)
   
          0.582
JNB_15558
Uncharacterized protein (149 aa)
              0.507
JNB_15578
Transport permease protein (265 aa)
              0.476
JNB_15573
Putative ABC transporter ATP-binding protein (289 aa)
              0.476
JNB_16739
Integral membrane efflux protein (432 aa)
   
          0.475
JNB_15588
Two-component system, regulatory protein (210 aa)
              0.475
JNB_15583
Two-component system, sensor protein (404 aa)
              0.475
JNB_04955
Putative export protein (426 aa)
   
          0.470
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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