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JNB_16023 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_16023" - Putative RNA polymerase sigma factor (ECF family) in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_16023Putative RNA polymerase sigma factor (ECF family) (184 aa)    
Predicted Functional Partners:
JNB_16018
Uncharacterized protein (296 aa)
              0.859
JNB_16028
Uncharacterized protein (350 aa)
              0.741
JNB_16008
Putative transcriptional regulator (124 aa)
 
          0.627
JNB_16033
Uncharacterized protein (233 aa)
              0.569
JNB_18193
Putative integral membrane protein (330 aa)
   
          0.563
JNB_16013
Uncharacterized protein (300 aa)
              0.563
JNB_16003
Uncharacterized protein (69 aa)
              0.521
JNB_16038
Lactate 2-monooxygenase (436 aa)
              0.466
JNB_15578
Transport permease protein (265 aa)
   
          0.429
JNB_10164
Uncharacterized protein (203 aa)
   
          0.429
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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