STRINGSTRING
JNB_16394 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_16394" - Transcriptional regulator, CarD-like regulator in Janibacter sp. HTCC2649
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_16394Transcriptional regulator, CarD-like regulator (160 aa)    
Predicted Functional Partners:
ispF
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (164 aa)
              0.689
JNB_16399
Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ; Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) (159 aa)
              0.689
rpoB
Transcriptase subunit beta ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1162 aa)
   
 
      0.680
JNB_19753
UPF0109 protein JNB_19753 (80 aa)
   
          0.576
JNB_16424
Cysteinyl-tRNA synthetase (465 aa)
              0.556
JNB_16429
Putative tRNA/rRNA methyltransferase (316 aa)
              0.554
ctc
General stress protein CTC ; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance (228 aa)
 
          0.530
JNB_16404
Putative oxidoreductase (256 aa)
              0.510
JNB_16389
Uncharacterized protein (161 aa)
              0.458
JNB_00630
UDP-MurNAc-pentapeptide phosphotransferase ; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan (360 aa)
   
          0.451
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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