STRINGSTRING
JNB_16544 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_16544" - Putative transcriptional regulator in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_16544Putative transcriptional regulator (111 aa)    
Predicted Functional Partners:
JNB_16549
Uncharacterized protein (173 aa)
 
          0.971
JNB_14328
Putative transcriptional regulator (134 aa)
   
          0.740
JNB_05585
Transcriptional regulator (116 aa)
   
          0.715
JNB_12653
Putative transcriptional regulator (114 aa)
   
          0.691
JNB_06074
Uncharacterized protein (173 aa)
 
          0.689
ung
Uracil-DNA glycosylase ; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (225 aa)
              0.618
JNB_16534
Uncharacterized protein (276 aa)
              0.618
JNB_16529
Putative acyl-CoA dehydrogenase (386 aa)
              0.512
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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