JNB_16699 protein (Janibacter sp. HTCC2649) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

JNB_16699

Uncharacterized protein (761 aa)

Predicted Functional Partners:

JNB_16679

0.790

JNB_16704

0.655

JNB_18778

0.643

JNB_18618

0.634

JNB_07639

0.633

lnt

0.621

JNB_07419

0.578

JNB_15668

0.566

JNB_01810

0.566

JNB_03755

0.560

Your Current Organism:

Janibacter sp. HTCC2649

NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but resolution at 400 dpi

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as simple tabular text output:

download

TSV: tab separated values - can be opened in Excel

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
JNB_01810	JNB_16699	JNB_01810	JNB_16699	Uncharacterized protein	Uncharacterized protein	0.566
JNB_03755	JNB_07639	JNB_03755	JNB_07639	Putative membrane protein	Uncharacterized protein	0.483
JNB_03755	JNB_16699	JNB_03755	JNB_16699	Putative membrane protein	Uncharacterized protein	0.560
JNB_03755	JNB_18778	JNB_03755	JNB_18778	Putative membrane protein	Uncharacterized protein	0.441
JNB_07419	JNB_16699	JNB_07419	JNB_16699	Putative DNA helicase	Uncharacterized protein	0.578
JNB_07419	JNB_18778	JNB_07419	JNB_18778	Putative DNA helicase	Uncharacterized protein	0.471
JNB_07419	lnt	JNB_07419	JNB_02830	Putative DNA helicase	Apolipoprotein N-acyltransferase ; Transfers the fatty acyl group on membrane lipoproteins	0.414
JNB_07639	JNB_03755	JNB_07639	JNB_03755	Uncharacterized protein	Putative membrane protein	0.483
JNB_07639	JNB_16699	JNB_07639	JNB_16699	Uncharacterized protein	Uncharacterized protein	0.633
JNB_15668	JNB_16699	JNB_15668	JNB_16699	Uncharacterized protein	Uncharacterized protein	0.566
JNB_15668	JNB_18618	JNB_15668	JNB_18618	Uncharacterized protein	Uncharacterized protein	0.449
JNB_16679	JNB_16699	JNB_16679	JNB_16699	Putative ATP-dependent DNA helicase	Uncharacterized protein	0.790
JNB_16699	JNB_01810	JNB_16699	JNB_01810	Uncharacterized protein	Uncharacterized protein	0.566
JNB_16699	JNB_03755	JNB_16699	JNB_03755	Uncharacterized protein	Putative membrane protein	0.560
JNB_16699	JNB_07419	JNB_16699	JNB_07419	Uncharacterized protein	Putative DNA helicase	0.578
JNB_16699	JNB_07639	JNB_16699	JNB_07639	Uncharacterized protein	Uncharacterized protein	0.633
JNB_16699	JNB_15668	JNB_16699	JNB_15668	Uncharacterized protein	Uncharacterized protein	0.566
JNB_16699	JNB_16679	JNB_16699	JNB_16679	Uncharacterized protein	Putative ATP-dependent DNA helicase	0.790
JNB_16699	JNB_16704	JNB_16699	JNB_16704	Uncharacterized protein	Putative galactose mutarotase	0.655
JNB_16699	JNB_18618	JNB_16699	JNB_18618	Uncharacterized protein	Uncharacterized protein	0.634

page 1 of 2

Network

Neighborhood

Textmining

Cooccurrence

Experiments

Coexpression

Databases

Fusion

© STRING Consortium 2018

Credits

Access

Info

About