STRINGSTRING
JNB_16709 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_16709" - Putative membrane protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_16709Putative membrane protein (422 aa)    
Predicted Functional Partners:
JNB_04965
Probable acetyltransferase (298 aa)
   
          0.760
JNB_10159
Uncharacterized protein (461 aa)
   
          0.729
JNB_07084
Uncharacterized protein (311 aa)
   
          0.722
JNB_15288
Putative membrane protein (437 aa)
   
          0.699
JNB_08049
Putative ArsR-family transcriptional regulator (202 aa)
   
          0.628
JNB_00775
Uncharacterized protein (263 aa)
   
          0.599
JNB_16724
Uncharacterized protein (91 aa)
              0.575
JNB_16719
Uncharacterized protein (245 aa)
              0.575
JNB_16714
Cold shock protein (134 aa)
              0.575
JNB_00770
Uncharacterized protein (189 aa)
   
          0.558
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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