STRINGSTRING
JNB_16811 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_16811" - Putative transcriptional regulator in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_16811Putative transcriptional regulator (209 aa)    
Predicted Functional Partners:
JNB_16806
Uncharacterized protein (143 aa)
              0.745
JNB_16816
Uncharacterized protein (239 aa)
              0.616
JNB_12029
Uncharacterized protein (311 aa)
   
          0.552
JNB_00205
GCN5-related N-acetyltransferase (202 aa)
   
          0.525
JNB_14113
Uncharacterized protein (732 aa)
   
          0.444
JNB_15953
Uncharacterized protein (204 aa)
   
          0.429
JNB_16801
ATP-dependent RNA helicase (721 aa)
              0.418
JNB_13868
Putative hydrolase (301 aa)
   
          0.415
JNB_14323
Uncharacterized protein (173 aa)
   
          0.403
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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