STRINGSTRING
JNB_16888 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_16888" - Penicillin amidase in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_16888Penicillin amidase (880 aa)    
Predicted Functional Partners:
JNB_16883
Cell volume regulation protein CvrA (533 aa)
              0.657
JNB_18773
Uncharacterized protein (61 aa)
    
          0.645
JNB_19878
Antibiotic efflux protein (394 aa)
    
          0.471
JNB_10164
Uncharacterized protein (203 aa)
    
          0.460
JNB_03145
Uncharacterized protein (67 aa)
    
          0.435
JNB_16878
Uncharacterized protein (108 aa)
              0.425
JNB_19443
GCN5-related N-acetyltransferase (191 aa)
       
    0.419
JNB_18953
Acetyltransferase (372 aa)
       
    0.419
JNB_18228
Acetyltransferase, GNAT family, putative (187 aa)
       
    0.419
JNB_17268
Putative acetyltransferase (190 aa)
       
    0.419
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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