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ctc protein (Janibacter sp. HTCC2649) - STRING interaction network
"ctc" - General stress protein CTC in Janibacter sp. HTCC2649
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ctcGeneral stress protein CTC ; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance (228 aa)    
Predicted Functional Partners:
rplU
50S ribosomal protein L21 ; This protein binds to 23S rRNA in the presence of protein L20 (101 aa)
   
  0.994
rpmA
50S ribosomal protein L27 (90 aa)
   
  0.990
rplQ
50S ribosomal protein L17 (237 aa)
 
  0.989
rplD
50S ribosomal protein L4 ; Forms part of the polypeptide exit tunnel (331 aa)
   
  0.989
rplM
50S ribosomal protein L13 ; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (147 aa)
   
  0.988
rplJ
50S ribosomal protein L10 ; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors (211 aa)
   
  0.987
rplP
50S ribosomal protein L16 ; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs (139 aa)
   
  0.987
rplR
50S ribosomal protein L18 ; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (122 aa)
   
  0.986
rpmD
50S ribosomal protein L30 (60 aa)
     
  0.985
rplC
50S ribosomal protein L3 ; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (218 aa)
   
  0.984
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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