STRINGSTRING
JNB_17198 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_17198" - Uncharacterized protein in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_17198Uncharacterized protein (175 aa)    
Predicted Functional Partners:
JNB_17203
Putative exopolyphosphatase (316 aa)
 
 
  0.990
JNB_17193
Putative membrane protein (179 aa)
 
     
  0.919
eno
2-phosphoglycerate dehydratase ; Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis (432 aa)
   
        0.874
rpoZ
Transcriptase subunit omega ; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (87 aa)
   
          0.760
JNB_09379
Putative DNA-binding protein (308 aa)
 
    0.736
JNB_01795
Uncharacterized protein (99 aa)
   
          0.732
JNB_02815
RNA polymerase-binding protein RbpA ; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters (120 aa)
   
          0.728
JNB_19038
Transcriptional regulator WhiB ; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (82 aa)
   
          0.719
JNB_18738
Transcriptional regulator WhiB ; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (114 aa)
   
          0.713
JNB_03045
Uncharacterized protein (333 aa)
   
          0.700
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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