STRINGSTRING
JNB_17248 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_17248" - Putative rubredoxin in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_17248Putative rubredoxin (475 aa)    
Predicted Functional Partners:
JNB_17253
Possible transcriptional regulatory protein (Probably tetr-family protein) (203 aa)
 
          0.956
JNB_17258
2,4-dienoyl-CoA reductase (677 aa)
 
          0.709
JNB_07459
Putative dehydrogenase (354 aa)
         
  0.672
JNB_08559
Uncharacterized protein (347 aa)
         
  0.629
JNB_12798
Hypothetical short chain dehydrogenase (217 aa)
   
          0.545
JNB_13858
Putative fatty acid desaturase (444 aa)
   
          0.538
JNB_11144
Putative fatty acid oxidative multifunctional enzyme (728 aa)
   
          0.484
JNB_20558
K+ transport flavoprotein (493 aa)
   
   
  0.469
JNB_17243
Putative cystathionine beta-synthase (458 aa)
              0.443
JNB_14708
Putative phosphoglycerate mutase related protein (229 aa)
   
          0.441
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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