STRINGSTRING
JNB_17388 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_17388" - Putative acyltransferase in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_17388Putative acyltransferase (387 aa)    
Predicted Functional Partners:
JNB_03730
Uncharacterized protein (672 aa)
   
          0.773
JNB_03055
MetH (1266 aa)
       
    0.674
JNB_05540
Possible glycosyl hydrolase (552 aa)
 
     
  0.622
JNB_17383
Secreted protein (216 aa)
              0.609
JNB_10524
Uncharacterized protein (381 aa)
 
   
    0.527
JNB_03700
Uncharacterized protein (1329 aa)
   
          0.499
JNB_03720
Uncharacterized protein (575 aa)
 
          0.489
JNB_19503
Uncharacterized protein (207 aa)
   
          0.447
JNB_18543
Putative acetyltransferase (199 aa)
   
 
    0.443
JNB_18073
Putative acetyl transferase protein (219 aa)
   
 
    0.443
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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