STRINGSTRING
gabD2 protein (Janibacter sp. HTCC2649) - STRING interaction network
"gabD2" - Succinic semialdehyde dehydrogenase in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gabD2Succinic semialdehyde dehydrogenase (529 aa)    
Predicted Functional Partners:
JNB_17568
Putative cholesterol oxidase (591 aa)
 
 
  0.975
JNB_03815
Putative glutamate synthase (NADPH) large subunit (1514 aa)
   
 
  0.933
JNB_08654
Methylmalonyl-CoA mutase, N-terminal (1080 aa)
         
  0.930
JNB_08914
Putative oxidoreductase (624 aa)
   
  0.928
JNB_08504
4-aminobutyrate aminotransferase (452 aa)
   
  0.913
JNB_11144
Putative fatty acid oxidative multifunctional enzyme (728 aa)
   
  0.910
gcvP
Glycine dehydrogenase (aminomethyl-transferring) ; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein (962 aa)
   
  0.907
kgd
Alpha-ketoglutarate decarboxylase (1281 aa)
   
 
  0.899
JNB_04915
Putative aminotransferase protein (432 aa)
   
  0.887
acsA
Acyl-activating enzyme ; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA (654 aa)
   
  0.883
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
Server load: low (8%) [HD]