STRINGSTRING
JNB_17683 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_17683" - Uncharacterized protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_17683Uncharacterized protein (331 aa)    
Predicted Functional Partners:
JNB_13733
DNA ligase (319 aa)
 
  0.995
JNB_16664
DNA ligase (112 aa)
 
  0.957
JNB_12284
DNA ligase (539 aa)
 
  0.956
ku
Non-homologous end joining protein Ku ; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5’- and 3’- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD (294 aa)
 
   
  0.891
JNB_17678
Uncharacterized protein (291 aa)
              0.859
JNB_02045
DNA ligase (713 aa)
 
 
0.824
JNB_17673
Uncharacterized protein (130 aa)
 
          0.725
JNB_17658
ModC (354 aa)
   
        0.685
JNB_17668
Probable molybdate-binding lipoprotein moda (273 aa)
              0.679
JNB_17663
Probable molbdenum-transport integral membrane protein abctransporter modb (264 aa)
              0.679
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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