STRINGSTRING
JNB_17838 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_17838" - Uncharacterized protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_17838Uncharacterized protein (114 aa)    
Predicted Functional Partners:
JNB_17833
Uncharacterized protein (210 aa)
              0.862
JNB_01405
Transcriptional regulator, PadR family protein (115 aa)
   
          0.778
JNB_17848
Putative deaminase (158 aa)
              0.759
JNB_17843
Uncharacterized protein (165 aa)
              0.759
JNB_17853
Uncharacterized protein (277 aa)
              0.721
JNB_17858
N-methylhydantoinase (ATP-hydrolyzing) B 2 (644 aa)
              0.685
JNB_17863
N-methylhydantoinase (ATP-hydrolyzing) A 2 (701 aa)
              0.599
JNB_17823
AccD3 (497 aa)
              0.584
JNB_17828
L-carnitine dehydratase/bile acid-inducible protein F (391 aa)
              0.575
JNB_17338
Transport permease protein (282 aa)
         
  0.432
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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