STRINGSTRING
JNB_18023 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_18023" - O-antigen biosynthesis protein in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_18023O-antigen biosynthesis protein (377 aa)    
Predicted Functional Partners:
JNB_18028
Capsular polysaccharide synthesis enzyme CapF (368 aa)
 
 
  0.998
JNB_18033
Polysaccharide biosynthesis protein (342 aa)
 
 
  0.995
JNB_18038
Predicted glycosyltransferase (264 aa)
 
   
  0.989
JNB_05570
Putative lipopolysaccharide biosynthesis protein (441 aa)
 
 
  0.929
JNB_18018
Uncharacterized protein (167 aa)
   
 
  0.924
JNB_18583
Putative UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (436 aa)
 
 
  0.912
JNB_18058
Probable dtdp-glucose 4,6-dehydratase transmembrane protein (603 aa)
   
 
  0.862
JNB_05575
Probable dtdp-glucose 4,6-dehydratase transmembrane protein (603 aa)
   
 
  0.862
JNB_05485
Putative GDP-D-mannose dehydratase (314 aa)
   
 
  0.847
JNB_18543
Putative acetyltransferase (199 aa)
   
 
  0.828
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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