STRINGSTRING
JNB_18053 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_18053" - Putative aminotransferase in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_18053Putative aminotransferase (380 aa)    
Predicted Functional Partners:
JNB_18043
Putative acetyl transferase protein (212 aa)
  0.995
JNB_18058
Probable dtdp-glucose 4,6-dehydratase transmembrane protein (603 aa)
 
 
  0.992
JNB_18048
Probable glycosyl transferase transmembrane protein (201 aa)
 
     
  0.968
JNB_18073
Putative acetyl transferase protein (219 aa)
  0.967
JNB_05575
Probable dtdp-glucose 4,6-dehydratase transmembrane protein (603 aa)
 
 
  0.950
JNB_18028
Capsular polysaccharide synthesis enzyme CapF (368 aa)
   
 
  0.927
JNB_18033
Polysaccharide biosynthesis protein (342 aa)
 
 
  0.897
JNB_18543
Putative acetyltransferase (199 aa)
 
  0.887
JNB_13788
Putative oxidoreductase (345 aa)
 
 
  0.842
JNB_18063
Cell surface polysaccharide biosynthesis / Chain length determinant protein (479 aa)
         
  0.831
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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