STRINGSTRING
JNB_18083 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_18083" - Galactokinase in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_18083Galactokinase (384 aa)    
Predicted Functional Partners:
JNB_17983
UDP-glucose 4-epimerase (337 aa)
 
  0.983
JNB_16704
Putative galactose mutarotase (306 aa)
   
  0.972
JNB_17798
Alpha-galactosidase (722 aa)
 
   
  0.923
JNB_16898
UTP--glucose-1-phosphate uridylyltransferase (464 aa)
   
 
  0.724
trpS
Tryptophanyl-tRNA synthetase (343 aa)
   
        0.694
JNB_18093
Putative secreted protein (170 aa)
              0.669
rpsL
30S ribosomal protein S12 ; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit (124 aa)
           
  0.658
JNB_04350
Ornithine carbamoyltransferase ; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline (318 aa)
           
  0.658
JNB_18098
Membrane protein ribonuclease BN-like family protein (370 aa)
              0.657
JNB_03775
DNA polymerase (889 aa)
         
  0.656
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
Server load: low (19%) [HD]