STRINGSTRING
JNB_18188 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_18188" - Putative integral membrane protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_18188Putative integral membrane protein (216 aa)    
Predicted Functional Partners:
JNB_18173
Uncharacterized protein (430 aa)
 
        0.973
JNB_18193
Putative integral membrane protein (330 aa)
 
          0.970
JNB_18183
Secreted protein (397 aa)
 
          0.967
JNB_18178
Putative regulatory protein (341 aa)
 
        0.943
JNB_18168
Possible conserved membrane protein (273 aa)
 
          0.779
JNB_18163
Putative membrane protein (331 aa)
    
          0.778
JNB_18748
Putative secreted protein (487 aa)
    
          0.540
JNB_18198
Uncharacterized protein (124 aa)
              0.524
JNB_04965
Probable acetyltransferase (298 aa)
    
          0.510
JNB_13538
Methanol dehydrogenase regulatory protein (322 aa)
   
        0.428
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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