STRINGSTRING
JNB_18873 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_18873" - Putative membrane protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_18873Putative membrane protein (654 aa)    
Predicted Functional Partners:
JNB_18868
Flp pilus assembly protein TadA (454 aa)
 
   
  0.986
JNB_18863
Probable chromosome partitioning ATPase (388 aa)
 
          0.966
JNB_18878
Probable secretion system protein TadC (301 aa)
 
   
0.935
JNB_09769
Putative conjugal transfer protein (441 aa)
 
   
  0.908
JNB_06654
Putative type II/type IV pathway secretion protein (409 aa)
 
   
  0.900
JNB_00780
Secretion system protein (470 aa)
 
   
  0.899
JNB_18858
Uncharacterized protein (263 aa)
              0.880
JNB_06644
Uncharacterized protein (310 aa)
   
          0.756
JNB_18883
Lipopolysaccharide modification acyltransferase (349 aa)
              0.669
JNB_18853
Uncharacterized protein (415 aa)
              0.641
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
Server load: low (9%) [HD]