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JNB_18903 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_18903" - Uncharacterized protein in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_18903Uncharacterized protein (133 aa)    
Predicted Functional Partners:
rph
tRNA nucleotidyltransferase ; Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates (254 aa)
       
    0.759
JNB_17343
Putative threonine dehydratase (417 aa)
 
   
  0.646
JNB_15183
Translation elongation factor EF-G (685 aa)
     
    0.643
fusA
Elongation factor G ; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (705 aa)
     
    0.643
JNB_19003
Delta-1-pyrroline-5-carboxylate dehydrogenase 1 (543 aa)
   
  0.602
JNB_19943
Succinate-semialdehyde dehydrogenase (NAD(P)+) (484 aa)
   
  0.602
JNB_19348
Probable aldehyde dehydrogenase AldC (457 aa)
   
  0.602
JNB_18213
Putative aldehyde dehydrogenase (482 aa)
   
  0.602
gabD2
Succinic semialdehyde dehydrogenase (529 aa)
   
  0.602
JNB_13823
Methylmalonate-semialdehyde dehydrogenase (500 aa)
   
  0.602
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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