STRINGSTRING
JNB_19338 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_19338" - Putative transcriptional regulator in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_19338Putative transcriptional regulator (248 aa)    
Predicted Functional Partners:
JNB_19343
Putative glutamine synthetase (461 aa)
 
          0.928
JNB_19348
Probable aldehyde dehydrogenase AldC (457 aa)
 
 
  0.911
JNB_19353
Short chain dehydrogenase (255 aa)
 
          0.909
JNB_19323
Possible amino acid/metabolite permease (529 aa)
 
          0.770
JNB_19358
Uncharacterized protein (242 aa)
              0.760
JNB_10624
Uncharacterized protein (265 aa)
   
          0.746
JNB_19328
Uncharacterized protein (304 aa)
 
          0.732
JNB_02090
Putative oxidoreductase (943 aa)
   
 
  0.716
JNB_19333
Putative dehydrogenase protein (822 aa)
              0.679
JNB_10384
Putative GntR-family transcriptional regulator (242 aa)
   
          0.672
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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