STRINGSTRING
JNB_19388 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_19388" - 2-isopropylmalate synthase in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_193882-isopropylmalate synthase (153 aa)    
Predicted Functional Partners:
JNB_12039
Uncharacterized protein (151 aa)
 
            0.740
JNB_01275
Putative membrane protein (270 aa)
   
          0.601
JNB_13123
Uncharacterized protein (113 aa)
   
          0.571
JNB_06804
Uncharacterized protein (420 aa)
   
          0.563
JNB_09869
Uncharacterized protein (110 aa)
   
          0.554
JNB_18563
Putative methyltransferase (226 aa)
   
          0.501
JNB_10844
Uncharacterized protein (174 aa)
   
          0.465
JNB_05450
Uncharacterized protein (484 aa)
   
          0.454
JNB_15973
Uncharacterized protein (155 aa)
   
          0.433
JNB_14468
Uncharacterized protein (234 aa)
   
          0.433
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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